Research

Biophysically Informed Sequence Encodings for Weak-Affinity DNA-DNA Binding Prediction

How a DNA sequence pair is encoded shapes what a model can learn about hybridization. Manuscript under review.

BINND: Deep Learning Predicts Dissimilar DNA-DNA Binding and Engineers Hyperconnected Networks

Accelerating K-mer Counting for Genomic Analysis in a Shared Memory Environment

Optimizing K-mer Counting and Querying in Commodity Clusters

Optimizing B+-Tree for Byte-Addressable Non-Volatile Memory

Autism Spectrum Disorder Indicative Decision Support System using Psychophysiological Data